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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.22.3

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/MultiQC/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-06-26, 12:32 CEST based on data in: /Users/modesto/data/TnSeq_thermus/00_fastp/reports_dd

        General Statistics

        Showing 4/4 rows and 5/7 columns.
        Sample Name% DuplicationM Reads After FilteringGC content% PF% Adapter
        TNB-01_S1_L001_R1_001
        78.2%
        0.9M
        60.2%
        41.4%
        0.4%
        TNB-03_S3_L001_R1_001
        72.4%
        2.7M
        65.4%
        83.9%
        0.5%
        TNB-07_S3_L001_R1_001
        74.2%
        1.3M
        65.7%
        88.3%
        0.2%
        TNB-09_S5_L001_R1_001
        78.6%
        1.7M
        63.8%
        92.1%
        0.2%

        fastp

        Version: 0.23.4

        fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...).DOI: 10.1093/bioinformatics/bty560.

        Filtered Reads

        Filtering statistics of sampled reads.

        Created with MultiQC

        Sequence Quality

        Average sequencing quality over each base of all reads.

        Created with MultiQC

        GC Content

        Average GC content over each base of all reads.

        Created with MultiQC

        N content

        Average N content over each base of all reads.

        Created with MultiQC

        Software Versions

        Software Versions lists versions of software tools extracted from file contents.

        SoftwareVersion
        fastp0.23.4

        MultiQC v1.22.3 - Written by Phil Ewels, available on GitHub.

        This report uses Plotly, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.